I would think you would be able to use the line level output (pre-out) on your receiver into the inputs to the sub and then the line level outputs on the sub back to your receiver into one of it's line level inputs such as Aux1. That way the whole signal goes to the sub where it is filtered, based on the crossover setting, and then returned to your receiver to be fed to the amp section and then to your speakers. There should be no degradation of the signal and you use the sub controls to determine how much low frequency stuff is sent to your smaller speakers.
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Music system
Model 990/7500/Magnepan 1.6 QRs/Technics SL1200 MK2/Aperion S-12 Subwoofer/OWA3/Sony NS75H DVD
APC H15 Power Conditioner

TV System
Large Advent Loudspeakers/ Polk center/Monoprice surrounds/Panasonic Viera 42 inch/Onkyo HT-RC260/Sony BDP S590/Directv


Home Theater System
Onkyo PR-SC886/Outlaw 7125 Klipsch RF-82 L/R,RC-62 center, RB-35 SR/SL, BENQ HT1075, Outlaw LFM1-EX/OPPO BDP-83/Directv
Harmony ONE
Blue Jeans and Monoprice interconnects
APC H15 Power Conditioner