Duh, I wasn't thinking. For some reason I was thinking I needed a sub-tone via a Dolby Digital track at one specific frequency. That's not the case to do this test. But, I used a THX test disc as was suggested.
For all testing, I turned the amp off that powers my 5 channels and left only the sub on.
Running a Dolby Digital test via THX Optimizer on The Incredibles...
-It didn't matter if my mains were set to large or small, the crossover drastically modified the output on my sub when the THX optimizer was sending an LFE signal.
I decided to take it a step further and go analog and play an SACD, unplugging all analog inputs from my player to the 990 except leaving the subwoofer analog input connected. I wanted to do this to ensure bass from other channels wasn't getting mixed in to the subwoofer out on the 990.
-Essentially the same thing. I played Dard Side Of The Moon with the deep bass on the first track and switching the crossover drastically modified the output on my sub.
The change in subwoofer output on both tests was audible and I could measure it with my SPL meter.
I guess what this boils down to is that the 990 does apply a low pass crossover on the LFE channel. Needless to say, I will be leaving my crossover set to 120Hz due to the standard. I don't wanna lose any bass