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If you set all of your speakers to large, and make sure that your soundfield is set to DTS-ES, and not DTS, (shown in the upper, right-hand corner of the LCD display) you will not get LFE.

If you go back and read my posts, you will see that I agree with this statement . I am saying if you set your fronts and center to large, but your surrounds to small, you will have LFE.
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With our speakers set to small, our subs will play the crossed-over bass from our speakers, but the LFE encoded sound will be missing.
Hmmmm, I have not seen where anybody has had a problem with speakers config'ed to small. In fact, the person who started this thread said:

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I bought my first DVD with a DTS-ES 6.1 discrete soundtrack."Lord of the Rings" extended verison.Upon viewing,I noticted my sub's had no output. I had front speakers set at "Large", I switched them to "Small" and the sub had normal output.

Best wishes....
Steve